seq_stat_prop: Compute proportions for characters
In bioseq: A Toolbox for Manipulating Biological Sequences
View source: R/seq_stat_operations.R
seq_stat_prop R Documentation
Compute proportions for characters
Description
Compute proportions for characters
Usage
seq_stat_prop(x, gaps = FALSE)
Arguments
x
a DNA, RNA or AA vector.
gaps
if FALSE gaps are ignored.
Value
A list of vectors indicating the
proportion of characters in each sequence.
See Also
Other op-misc:
seq_disambiguate_IUPAC(),
seq_nchar(),
seq_nseq(),
seq_spellout(),
seq_stat_gc()
Examples
x <- dna(c("ATGCAGA", "GGR-----","TTGCCTAGKTGAACC"))
seq_stat_prop(x)
seq_stat_prop(x, gaps = TRUE)
bioseq documentation built on Sept. 6, 2022, 5:07 p.m.
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View source: R/seq_stat_operations.R
| seq_stat_prop | R Documentation |
Compute proportions for characters
Description
Compute proportions for characters
Usage
seq_stat_prop(x, gaps = FALSE)
Arguments
x |
a DNA, RNA or AA vector. |
gaps |
if |
Value
A list of vectors indicating the proportion of characters in each sequence.
See Also
Other op-misc:
seq_disambiguate_IUPAC(),
seq_nchar(),
seq_nseq(),
seq_spellout(),
seq_stat_gc()
Examples
x <- dna(c("ATGCAGA", "GGR-----","TTGCCTAGKTGAACC"))
seq_stat_prop(x)
seq_stat_prop(x, gaps = TRUE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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