Nothing
## Run minimization
shin92exalcove_opt <- function(params = c(2, 1, .25, .75),
recompute = FALSE,
trace = 0) {
## Define objective function to minimize
.alcove.shin92 <- function(params) {
out <- shin92exalcove(params)
ret <- ssecl(out$c2p,catlearn::shin92$c2acc)
## 'shin92' for development
## 'catlearn::shin92' for package release
return(ret)
}
## Set level of output verbosity
ctrl <- list(trace=trace)
## Set bounds for optimzation
lb <- c(0.001,0.001,0.001,0.001) # Lower bounds
ub <- c(20,5,.90,.90) # Upper bounds
if(recompute) {
## Run optimzation
names(params) <- c('c','phi','la','lw')
result <- optim(params, .alcove.shin92, method = "L-BFGS-B",
lower = lb, upper = ub, control = ctrl)
params <- result$par
} else {
## Set result from stored copy
params <- c(2.16500692601153, 0.636557148593828,
0.0985741221287437, 0.9)
}
return(params)
}
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