API for cghseg
Segmentation Methods for Array CGH Analysis

Global functions
CGHdata-class	Man page
CGHoptions-class	Man page
CGHresults-class	Man page
ClassiSeg	Source code
ClassiSeg_	Source code
ClassiSeg_2	Source code
ClassiSeg_2_	Source code
EMalgo	Source code
EMinit	Source code
Estep	Source code
GCnorm<-	Man page
GCnorm<-,CGHoptions-method	Man page
GCnorm<--methods	Man page
Kselection	Source code
PKselection	Source code
[,CGHdata-method	Man page
[,CGHoptions-method	Man page
[,CGHresults-method	Man page
alpha<-	Man page
alpha<-,CGHoptions-method	Man page
alpha<--methods	Man page
beta<-	Man page
beta<-,CGHoptions-method	Man page
beta<--methods	Man page
bpwmissing	Source code Source code
bpwmissing.calls	Source code
calling<-	Man page
calling<-,CGHoptions-method	Man page
calling<--methods	Man page
colibriR_c	Source code
compactEMalgo	Source code
compactEMinit	Source code
getbgoutliers	Man page
getbgoutliers,CGHresults-method	Man page
getbgoutliers-methods	Man page
getbp	Man page
getbp,CGHresults-method	Man page
getbp-methods	Man page
getlevels	Man page
getlevels,CGHresults-method	Man page
getlevels-methods	Man page
getmBIC	Source code
getmultiKmax	Man page
getmultiKmax,CGHdata-method	Man page
getmultiKmax-methods	Man page
getprobebias,CGHresults-method	Man page
getsegprofiles	Man page
getsegprofiles,CGHresults-method	Man page
getsegprofiles-methods	Man page
getuniKmax	Man page
getuniKmax,CGHdata-method	Man page
getuniKmax-methods	Man page
hybrid	Source code
initialize,CGHdata-method	Man page
initialize,CGHresults-method	Man page
itermax<-	Man page
itermax<-,CGHoptions-method	Man page
itermax<--methods	Man page
logdens	Source code
lvinc	Source code
meanRuptR_c	Source code
meansqRuptR_c	Source code
multiseg	Man page
multiseg,CGHdata-method	Man page
multiseg-methods	Man page
nblevels<-	Man page
nblevels<-,CGHoptions-method	Man page
nblevels<--methods	Man page
nbprocs<-	Man page
nbprocs<-,CGHoptions-method	Man page
nbprocs<--methods	Man page
print,CGHdata-method	Man page
print,CGHoptions-method	Man page
quicklvinc	Source code
retour	Source code
segibp	Source code
segmean	Source code
segmeanCO	Source code
segmeanGR	Source code
segmixt	Source code
segmixtGR	Source code
select<-	Man page
select<-,CGHoptions-method	Man page
select<--methods	Man page
show,CGHdata-method	Man page
show,CGHoptions-method	Man page
simulprofiles	Man page Source code
summary,CGHdata-method	Man page
summary,CGHresults-method	Man page
uniseg	Man page
uniseg,CGHdata-method	Man page
uniseg-methods	Man page
unisegclust	Source code
unisegmean	Source code
unisegmixt	Source code
wavenorm<-	Man page
wavenorm<-,CGHoptions-method	Man page
wavenorm<--methods	Man page