getsegprofiles

Description

Extract segmented profiles from a CGHresults object

Usage

1
getsegprofiles(.Object)

Arguments

.Object

an object of the CGHresults class

Value

segprofiles

list of segmented profiles

Author(s)

F. Picard, E. Lebarbier, M. Hoebeke, G. Rigaill, B. Thiam, S. Robin

References

Joint segmentation, calling and normalization of multiple CGH profiles, Biostatistics (2011)

Examples

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#set.seed(1)
#simul          = simulprofiles(M=5,n=100,k.mean=2,SNR=5,lambda=1)
#CGHd           = new("CGHdata",Y=simul$Y)
#CGHo           = new("CGHoptions")
#calling(CGHo)  = FALSE
#CGHr           = multiseg(CGHd,CGHo)
#segprofiles    = getsegprofiles(CGHr)

#calling(CGHo)  = TRUE
#CGHr           = multiseg(CGHd,CGHo)
#segprofiles    = getsegprofiles(CGHr)