calling: Replace slot calling
In cghseg: Segmentation Methods for Array CGH Analysis
Description
Arguments
Details
Author(s)
References
See Also
Examples
Description
changes slot calling of a CGHoptions object
Arguments
.Object
an object of the CGHoptions class
Details
CGHo["calling"] determines if calling should be done during
segmentation (logical). The number of levels is fixed and set in CGHo["nblevels"]
Author(s)
F. Picard, E. Lebarbier, M. Hoebeke, G. Rigaill, B. Thiam, S. Robin
References
Joint segmentation, calling and normalization of multiple CGH profiles, Biostatistics (2011)
See Also
nblevels
Examples
1
2
3
4
5
6
#set.seed(1)
#simul = simulprofiles(M=5,n=100,k.mean=2,SNR=5,lambda=1)
#CGHd = new("CGHdata",Y=simul$Y)
#CGHo = new("CGHoptions")
#calling(CGHo) = TRUE
#CGHr = multiseg(CGHd,CGHo)
cghseg documentation built on May 30, 2017, 6:56 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Arguments Details Author(s) References See Also Examples
Description
changes slot calling of a CGHoptions object
Arguments
.Object |
an object of the CGHoptions class |
Details
CGHo["calling"] determines if calling should be done during
segmentation (logical). The number of levels is fixed and set in CGHo["nblevels"]
Author(s)
F. Picard, E. Lebarbier, M. Hoebeke, G. Rigaill, B. Thiam, S. Robin
References
Joint segmentation, calling and normalization of multiple CGH profiles, Biostatistics (2011)
See Also
nblevels
Examples
1 2 3 4 5 6 | #set.seed(1)
#simul = simulprofiles(M=5,n=100,k.mean=2,SNR=5,lambda=1)
#CGHd = new("CGHdata",Y=simul$Y)
#CGHo = new("CGHoptions")
#calling(CGHo) = TRUE
#CGHr = multiseg(CGHd,CGHo)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.