getbp: Breakpoints frequencies

Description Usage Arguments Value Author(s) References Examples

Description

Gives the frequency of breakpoints

Usage

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getbp(.Object)

Arguments

.Object

object of class CGHresults

Value

bplist

list of dataframes containing 0/1 for the position of the breaks

Author(s)

F. Picard, E. Lebarbier, M. Hoebeke, G. Rigaill, B. Thiam, S. Robin

References

Joint segmentation, calling and normalization of multiple CGH profiles, Biostatistics (2011)

Examples

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#set.seed(1)
#simul          = simulprofiles(M=5,n=100,k.mean=2,SNR=5,lambda=1)
#CGHd           = new("CGHdata",Y=simul$Y)
#CGHo           = new("CGHoptions")
#CGHr           = multiseg(CGHd,CGHo)
#bplist         = getbp(CGHr)


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