Description Arguments Details Author(s) References See Also Examples
changes slot select
of a CGHoptions object
.Object |
an object of the CGHoptions class |
CGHo["select"]
sets the model selection criterion to be used in the
procedure. The default criterion is based on the mBIC proposed by
Zhang & Siegmund (2007). If CGHo["select"]=="none"
then the
algorithm is run for the maximum number of segments.
F. Picard, E. Lebarbier, M. Hoebeke, G. Rigaill, B. Thiam, S. Robin
Joint segmentation, calling and normalization of multiple CGH profiles, Biostatistics (2011)
alpha, beta, getmultiKmax, getuniKmax
1 2 3 4 5 6 7 8 9 | #set.seed(1)
#simul = simulprofiles(M=5,n=100,k.mean=2,SNR=5,lambda=1)
#CGHd = new("CGHdata",Y=simul$Y)
#CGHo = new("CGHoptions")
#select(CGHo) = "mBIC"
#CGHr = multiseg(CGHd,CGHo)
#select(CGHo) = "none"
#CGHr = multiseg(CGHd,CGHo)
|
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