add.fragment.coordinates: add.fragment.coordinates

In chicane: Capture Hi-C Analysis Engine

Description

Expand target and bait IDs of the form chrN:start-end to separate coordinate columns in the data table

Usage

add.fragment.coordinates(id.data)

Arguments

id.data

data table containing columns target.id and/or bait.id to be expanded

Value

Data table with added coordinate columns for target and bait (as applicable).

Author(s)

Erle Holgersen <[e-mail]>

Examples

data(bre80);
add.fragment.coordinates(bre80[, .(bait.id, target.id)]);

chicane documentation built on Nov. 7, 2021, 1:07 a.m.