read.bed: read.bed
In chicane: Capture Hi-C Analysis Engine
Description
Usage
Arguments
Value
Examples
Description
Read a BED file and return regions in chrN:start-end format
Usage
1
Arguments
bed.path
Path to bed file
zero.based
Whether to return ID in zero-based coordinates
Value
vector of region IDs
Examples
1
2
bait.file <- system.file('extdata', '2q35.bed', package = 'chicane');
baits <- read.bed(bait.file);
chicane documentation built on Nov. 7, 2021, 1:07 a.m.
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Description Usage Arguments Value Examples
Description
Read a BED file and return regions in chrN:start-end format
Usage
1 |
Arguments
bed.path |
Path to bed file |
zero.based |
Whether to return ID in zero-based coordinates |
Value
vector of region IDs
Examples
1 2 | bait.file <- system.file('extdata', '2q35.bed', package = 'chicane');
baits <- read.bed(bait.file);
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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