Description Usage Arguments Author(s) References Examples
This is an internal function for using a C code while merging chromosome segments in the segmentation step.
1 2 |
nbSeg |
Number of current segments |
idStart |
Position indexes of the first probes for segments |
idEnd |
Positions indexes of the last probes for segments |
lBound |
Lower bound position for segments |
uBound |
Upper position for segments |
segVal |
Change values associated with segments |
segProba |
Probabilities associated with segments |
fcall |
Detection status associated with probes |
L2R |
Change values associated with probes |
nd |
Number of acceptable non-detection between two significant of a segment |
dm |
Average distance between two consecutive probes of the chromosome |
sigma |
Standard deviation of the residual observations, see reference |
Doulaye Dembele doulaye@igbmc.fr
Dembele D, Analysis of high biological data using their rank values, Stat Methods Med Res, accepted for publication, 2018
1 | # data(fdata);
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