newCollection.Chromosome: Generates a list of chromosomes cloning the original...

In galgo: Genetic Algorithms for Multivariate Statistical Models from Large-Scale Functional Genomics Data

Description

Generates a list of chromosomes cloning the original chromosome object. It only use the generic newCollection method.

Usage

## S3 method for class 'Chromosome'
newCollection(.O, ...)

Arguments

n	Number of object clones.

Value

Returns a list with cloned objects. The names are build with the class and a consecutive number.

Author(s)

Victor Trevino. Francesco Falciani Group. University of Birmingham, U.K. http://www.bip.bham.ac.uk/bioinf

References

Goldberg, David E. 1989 Genetic Algorithms in Search, Optimization and Machine Learning. Addison-Wesley Pub. Co. ISBN: 0201157675

See Also

For more information see Chromosome. unObject, as.list.Object, newCollection.Chromosome, newRandomCollection.Chromosome, Niche.

Examples

   cr <- Chromosome(genes=newCollection(Gene(shape1=1, shape2=100),5))
   cr
   # list of two new identical Chromosome objects (different id)
   newCollection(cr, 2)                
   ni <- Niche(chromosomes = newCollection(cr, 2))
   ni # same genes values, different objects
   generateRandom(ni)
   ni # different genes values
 
   # creation and random generation at the same time
   ni <- Niche(chromosomes = newRandomCollection(cr, 2))
   ni
 

galgo documentation built on May 2, 2019, 4:20 a.m.