aio | All-in-one Phasing |
bmh | Block Partitioning |
co | Crossover Detection |
cs | Chromosome Splitter |
genotypes | Example of Genotype Data Set |
hbp | Haplotype Blocks of Phased Data |
hh | Heatmap of Half-sibs |
hsphase-package | Phasing, Pedigree Reconstruction, Sire Imputation and... |
hss | Half-sib Family Splitter |
imageplot | Image Plot of Blocking Structure |
impute | Impute of Low Density SNP Marker to High Density (Paternal... |
map | Example of Map File |
ohd | Opposing Homozygote Detection |
ohg | Matrix of Opposing Homozygotes |
ohplot | Opposing Homozygotes Plot |
para | Parallel Analysis of Data |
pedigree | Example Pedigree |
pedigreeNaming | Fix Pedigree Errors |
phf | Half-Sib Family Phasing |
pm | Probability Matrix |
pogc | Parent Offspring Group Constructor |
readGenotype | Read and Check the Genotype File |
recombinations | Recombination Number |
rplot | Recombination Plot |
rpoh | Reconstruct Pedigree Based on Matrix of Opposing Homozygotes |
ssp | Sire Imputation and Phasing |
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