recombinations: Recombination Number

In hsphase: Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data

Recombination Number

Description

Counts the number of recombinations for each individual based on the block structure.

Usage

recombinations(blockMatrix)

Arguments

blockMatrix

matrix. Block structure (output of bmh).

Value

A numeric vector of recombination counts with length equal to the number of individuals (rows) in blockMatrix.

See Also

bmh

Examples

genotype <- matrix(c(
  2,1,0,0,
  2,0,2,2,
  0,0,2,2,
  0,2,0,0
), byrow = TRUE, ncol = 4)

recombinations(bmh(genotype))

hsphase documentation built on Feb. 17, 2026, 5:07 p.m.