find.dim.genes: Find model genes from PCA data

In iCellR: Analyzing High-Throughput Single Cell Sequencing Data

Description

This function takes an object of class iCellR finds the model genes to run a second round of PCA.

Usage

find.dim.genes(x = NULL, dims = 1:10, top.pos = 15, top.neg = 5)

Arguments

x	An object of class iCellR.
dims	PC dimentions to be used.
top.pos	Number of top positive marker genes to be taken from each PC, default = 15.
top.neg	Number of top negative marker genes to be taken from each PC, default = 5.

Value

An object of class iCellR.

iCellR documentation built on Oct. 9, 2021, 5:07 p.m.