Description Usage Arguments Value
This function takes an object of class iCellR and assignes cell cycle stage for the cells.
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object |
A data frame containing gene counts for cells. |
data.type |
Choose from "raw.data" or "main.data", "imputed.data", default = "main.data". |
scoring.List |
Genes that are used as a marker for phases. |
return.stats |
Return the data or object. If FALSE the object would be returned. |
scoring.method |
Choose from "tirosh (Tirosh, et. al. 2016), mean, sum, gsva, ssgsea, zscore and plage. , default = "tirosh". |
The data frame object
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