plot.summary.IDEMINFER: Plot survivors only and SACE analysis results

In idem: Inference in Randomized Controlled Trials with Death and Missingness

Plot survivors only and SACE analysis results

Description

Generate a plot of survivor only and survivor average causal effect values

Usage

## S3 method for class 'summary.IDEMINFER'
plot(
  x,
  opt = c("pvalue", "effect"),
  by.sace = TRUE,
  delta0 = 0,
  delta1 = 0,
  sace.delta = NULL,
  ...
)

Arguments

x	A class summary.IDEMSACE object generated by summary of IDEMINFER
opt	contour plots of pvalue or effect
by.sace	Logical value. If True, create a contour plot for given SACE sensitivity parameter. Otherwise, create a plot for treatment effect for given imputation sensitivity parameters
delta0	Selected treatment arm 0 sensitivity parameters
delta1	Selected treatment arm 1 sensitivity parameters
sace.delta	Single SACE sensitivity parameter
...	Options for plot

Details

The plot function will only generate the contour plot of p-values or treatment effects on functional outcomes for survivors only analyses.

For SACE analysis, the plot function generates contour plot of line plot based on the value of by.sace.

Examples

## Not run: 
rst.abc <- imData(abc, trt="TRT", surv="SURV", outcome=c("Y1","Y2"),
                 y0=NULL, endfml="Y2",
                 trt.label = c("UC+SBT", "SAT+SBT"),
                 cov=c("AGE"), duration=365, bounds=c(0,100));
rst.fit  <- imFitModel(rst.abc);
rst.imp <- imImpAll(rst.fit, deltas=c(-0.25,0,0.25),
                    normal=TRUE, chains = 2, iter = 2000, warmup = 1000);
rst.infer <- imInfer(rst.imp, n.boot = 100, effect.quantiles = c(0.25,0.5,0.75));
rst.survivors <- summary(rst.infer, opt="survivor");
plot(rst.survivors);
## End(Not run)

idem documentation built on Aug. 9, 2023, 5:08 p.m.