chordExample: Example data of chord plot of NG-Circos

In interacCircos: The Visualization of Interactive Circos Plot

Description

The data is in matrix with column names. The order and number is same as column, representing the same items

Usage

chordExample

Format

A data frame in which each value represents the relationship from a column to a row:

C.CK

Genome 1, the name for each arc

C.NPK

Genome 2, the name for each arc

GC.CK

Genome 2, the name for each arc

GC.NPK

Genome 2, the name for each arc

Alphaproteobacteria

Genome 2, the name for each arc

Betaproteobacteria

Genome 2, the name for each arc

Gammaproteobacteria

Genome 2, the name for each arc

Deltaproteobacteria

Genome 8, the name for each arc

Acidobacteria

Genome 9, the name for each arc

Actinobacteria

Genome 10, the name for each arc

Bacteroidetes

Genome 11, the name for each arc

Chloroflexi

Genome 12, the name for each arc

Firmicutes

Genome 13, the name for each arc

Gemmatimonadetes

Genome 14, the name for each arc

Planctomycetes

Genome 15, the name for each arc

Thaumarchaeota

Genome 16, the name for each arc

Verrucomicrobia

Genome 17, the name for each arc

Ascomycota

Genome 18, the name for each arc

Basidiomycota

Genome 19, the name for each arc

Zygomycota

Genome 20, the name for each arc

interacCircos documentation built on Jan. 21, 2021, 5:10 p.m.