CircosLine: Create a LINE module to a moduleList

In interacCircos: The Visualization of Interactive Circos Plot

Description

Display a multi-layer line plot in circos

Usage

CircosLine(
  modulename,
  compareGroup = 1,
  maxRadius = 108,
  minRadius = 95,
  ValueAxisManualScale = FALSE,
  ValueAxisMaxScale = 10,
  ValueAxisMinScale = 0,
  color = "red",
  width = 2,
  type = "cardinal",
  animationDisplay = FALSE,
  animationDirection = "S2E",
  animationTime = 2000,
  animationDelay = 20,
  animationType = "bounce",
  data,
  ...
)

Arguments

modulename	The name of the new module.
compareGroup	The group number of this module in compare module
maxRadius, minRadius	Where the module should begin and end
ValueAxisManualScale	Whether manually control the scale of value
ValueAxisMaxScale, ValueAxisMinScale	The max and min scale value for manually control
color	Color for line
width	Width for line
type	Type for line, could be linear, cardinal, basis and monotone
animationDisplay	Whether display animation
animationDirection	The direction of animation, could be S2E(start to end) or E2S(end to start)
animationTime, animationDelay, animationType	The time, delay and display type for animation
data	A list of value with details including chr, pos, des, value and html. Details can be found on document.
...	Ignored

Value

The module tracks for line modules.

Examples

lineData<-lineExample
Circos(CircosLine('LINE01', data = lineData,maxRadius=200,minRadius=150,color= "#ff0031")+
CircosBackground('BG01',minRadius = 205,maxRadius = 150))

interacCircos documentation built on Jan. 21, 2021, 5:10 p.m.