phylo2mst: Conversion from PHYLO to MST Object
In ips: Interfaces to Phylogenetic Software in R
phylo2mst R Documentation
Conversion from PHYLO to MST Object
Description
Converts a phylogenetic tree (class phylo) into a
minimum spanning tree (class mst).
Usage
phylo2mst(phy)
Arguments
phy
An object of class phylo.
Details
The current version of phylo2mst does not handle polytomies
and does not incorporate branch length information. Note that topological
information is lost during the conversion.
Examples
phy <- rtree(12)
plot(phy)
mst <- phylo2mst(phy)
plot(mst)
ips documentation built on May 29, 2024, 4:39 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| phylo2mst | R Documentation |
Conversion from PHYLO to MST Object
Description
Converts a phylogenetic tree (class phylo) into a
minimum spanning tree (class mst).
Usage
phylo2mst(phy)
Arguments
phy |
An object of class |
Details
The current version of phylo2mst does not handle polytomies
and does not incorporate branch length information. Note that topological
information is lost during the conversion.
Examples
phy <- rtree(12)
plot(phy)
mst <- phylo2mst(phy)
plot(mst)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.