API for ips
Interfaces to Phylogenetic Software in R

Global functions
aliscore Man page Source code
code.simple.gaps Man page Source code
collapseUnsupportedEdges Man page Source code
delete.gaps Man page
deleteEmptyCells Man page Source code
deleteGaps Man page Source code
descendants Man page Source code
extractBEASTstats Man page Source code
extractMRBAYESstats Man page Source code
fillEndsWithN Man page
fixNodes Man page Source code
gblocks Man page Source code
ips Man page
ips-package Man page
ips.16S Man page
ips.28S Man page
ips.cox1 Man page
ips.tree Man page
mafft Man page Source code
mrbayes Man page Source code
mrbayes.mixed Man page Source code
multistate Man page
multistateMCMC Man page Source code
multistateML Man page Source code
noi Man page Source code
phylo2mafft Man page Source code
pis Man page Source code
prank Man page Source code
raxml Man page Source code
raxml.partitions Man page Source code
rbeauti Man page Source code
rbeauti.taxonset Man page Source code
read.beast Man page Source code
read.beast.table Man page Source code
read.fas Man page Source code
read.mrbayes Man page Source code
read.nex Man page Source code
read.phy Man page Source code
read.starbeast Man page Source code
read.xml Man page Source code
sister Man page Source code
terminal.clades Man page Source code
tipHeights Man page Source code
traitRate Man page Source code
traitRateOutput Man page Source code
traitRateParams Man page Source code
trimEnds Man page Source code
unresolve.clade Man page Source code
write.fas Man page Source code
write.nex Man page Source code
write.partitioned.nex Man page Source code
write.phy Man page Source code
ips documentation built on May 29, 2017, 3:24 p.m.