API for junctions
The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages
| Global functions | |
|---|---|
| apply_phasing_error | Source code |
| calc_k | Man page Source code |
| calc_ll_haploid | Source code |
| calc_ll_haploid_di | Source code |
| calculate_mat | Man page Source code |
| check_time_points | Source code |
| estimate_time | Man page Source code |
| estimate_time_all | Source code |
| estimate_time_chromosomes | Source code |
| estimate_time_cpp | Source code |
| estimate_time_diploid | Man page Source code |
| estimate_time_haploid | Man page Source code |
| estimate_time_individuals | Source code |
| estimate_time_one_chrom | Man page Source code |
| estimate_time_separate | Source code |
| get_num_markers | Source code |
| junctions | Man page |
| junctions-package | Man page |
| log_likelihood_diploid | Man page Source code |
| log_likelihood_haploid | Man page Source code |
| loglikelihood_unphased_cpp | Source code |
| number_of_junctions | Man page Source code |
| number_of_junctions_backcross | Man page Source code |
| number_of_junctions_di | Man page Source code |
| number_of_junctions_markers | Man page Source code |
| sim_backcrossing | Man page Source code |
| sim_fin_chrom | Man page Source code Source code |
| sim_inf_chrom | Man page Source code Source code |
| sim_phased_unphased | Man page Source code |
| sim_phased_unphased_cpp | Source code |
| simulate_backcrossing_cpp | Source code |
| time_error | Man page Source code |
