CIS_overlap: Generate colored GT table for CIS overlap across...
In lisat: Longitudinal Integration Site Analysis Toolkit
CIS_overlap R Documentation
Generate colored GT table for CIS overlap across samples/timepoints
Description
Generate colored GT table for CIS overlap across samples/timepoints
Usage
CIS_overlap(CIS_data, IS_raw, Timelevels = NULL)
Arguments
CIS_data
Data frame of CIS metrics (must have Chr and Locus columns)
IS_raw
Data frame of raw integration site data (must have Sample, Chr, Locus columns)
Timelevels
Optional vector of sample/timepoint levels for ordered display (default = NULL)
Value
gt table object with colored CIS overlap status (TRUE/FALSE)
lisat documentation built on March 27, 2026, 5:07 p.m.
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| CIS_overlap | R Documentation |
Generate colored GT table for CIS overlap across samples/timepoints
Description
Generate colored GT table for CIS overlap across samples/timepoints
Usage
CIS_overlap(CIS_data, IS_raw, Timelevels = NULL)
Arguments
CIS_data |
Data frame of CIS metrics (must have Chr and Locus columns) |
IS_raw |
Data frame of raw integration site data (must have Sample, Chr, Locus columns) |
Timelevels |
Optional vector of sample/timepoint levels for ordered display (default = NULL) |
Value
gt table object with colored CIS overlap status (TRUE/FALSE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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