Count_regions: Calculate regional distribution percentages of integration...
In lisat: Longitudinal Integration Site Analysis Toolkit
View source: R/Count_regions.R
Count_regions R Documentation
Calculate regional distribution percentages of integration sites (IS)
Description
Calculate regional distribution percentages of integration sites (IS)
Usage
Count_regions(IS_raw, Patient_timepoint)
Arguments
IS_raw
Data frame of raw integration site data (must have Sample column + regional annotation columns)
Patient_timepoint
Data frame mapping Sample_ID to Time_Point (columns: Sample_ID, Time_Point)
Value
List of data frames (per sample) with regional IS percentages (Exonic/Intronic/Enhancer etc.)
lisat documentation built on March 27, 2026, 5:07 p.m.
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View source: R/Count_regions.R
| Count_regions | R Documentation |
Calculate regional distribution percentages of integration sites (IS)
Description
Calculate regional distribution percentages of integration sites (IS)
Usage
Count_regions(IS_raw, Patient_timepoint)
Arguments
IS_raw |
Data frame of raw integration site data (must have Sample column + regional annotation columns) |
Patient_timepoint |
Data frame mapping Sample_ID to Time_Point (columns: Sample_ID, Time_Point) |
Value
List of data frames (per sample) with regional IS percentages (Exonic/Intronic/Enhancer etc.)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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