Files in mixAK
Multivariate Normal Mixture Models and Mixtures of Generalized Linear Mixed Models Including Model Based Clustering

inst
inst/CITATION
inst/doc
inst/doc/index.html
inst/doc/Tandmob.R inst/doc/Faithful.R
inst/doc/CITATION_includeMethodology
inst/doc/Galaxy.R
inst/doc/bodybg.jpg
inst/doc/PBCseq.R
inst/doc/arnost02.css
inst/doc/menuhover.jpg
src
src/NMix_Utils.cpp
src/NMix_PredCDFMarg.h
src/GLMM_scale_ZitZi.h
src/AK_Complex.h
src/AK_Basic.h
src/GLMM_create_SZitZiS.h
src/MCMC_Moments_NormalApprox.h
src/Misc_generatePermutations.h
src/00mixAK_init.cpp
src/NMix_PED.cpp
src/Dist_TmixMVN.cpp
src/Makevars
src/GLMM_copy_shift_eta_meanY_Zresp.h
src/Stat_Quantile.h
src/NMix_orderComp.cpp
src/NMix_Stephens_step2_transport.h
src/NMix_RJMCMCsplit.h
src/GLMM.h
src/GLMM_updateFixEf.h
src/GLMM_longitDA2.cpp
src/Dist_TMVN.h
src/GLMM_longitDA.h
src/GLMM_longitPred_nmix_gauss.cpp
src/NMix_RJMCMC_logJacLambdaVSigma.h
src/GLMM_updateRanEf.cpp
src/Rand_RotationMatrix.h
src/NMix_RJMCMCdeath.h
src/GLMM_eta_fixed_random2eta_meanY.h
src/GLMM_eta_fixed_random2eta_meanY.cpp
src/GLMM_newData.h
src/NMix_Deviance.h
src/NMix_Pr_y_and_cum_Pr_y.cpp
src/GLMM_create_SZitZiS_4longitDA.h
src/Dist_mixNorm.cpp
src/GLMM_fitted_Bernoulli_Logit.h
src/Dist_Wishart.cpp
src/AK_BSTAT.cpp
src/GLMM_updateFixEf.cpp
src/NMix_RJMCMC_aux_vector_u.h
src/NMix_updateWeights.h
src/Dist_Dirichlet.h
src/NMix_Stephens_step2_search.cpp
src/Misc_findIndexOfPermutation.cpp
src/NMix_Stephens_costMatrix.cpp
src/GLMM_updateHyperVars_eps.h
src/GLMM_create_XtX.cpp
src/NMix_updateHyperVars.h
src/GLMM_updateRanEf_QR.h
src/GLMM_PED.h
src/Dist_Wishart.h
src/LogLik_Bernoulli_Logit.h
src/NMix_MCMC.cpp
src/Stat_BLA.cpp
src/GLMM_Deviance.h
src/MCMC.h
src/GLMM_linear_predictors.h
src/Dist_MVN.h
src/Dist_TMVN.cpp
src/AK_Utils.h
src/GLMM_longitPred_nmix_gauss.h
src/NMix_Stephens_step2_search.h
src/NMix_PredDA.h
src/Dist_TmixNorm.cpp
src/NMix_updateAlloc.h
src/NMix_RJMCMCcombine.h
src/NMix_RJMCMCbirth.cpp
src/Stat_BLA.h
src/NMix_PED_coreMulti.h
src/GLMM_updateHyperVars_eps.cpp
src/NMix_updateCensObs.h
src/NMix_Stephens_step2_transport.cpp
src/AK_BLAS.h
src/LogLik_Gauss_Identity.h
src/NMix_NMixRelabel.h
src/NMix_PredDensMarg.h
src/Stat_Quantile.cpp
src/NMix_PED_coreUni.h
src/NMix_PredDensJoint2.cpp
src/NMix_PED_coreMulti.cpp
src/NMix_ChainsDerived.h
src/MCMC_Moments_NormalApprox_QR.h
src/GLMM_newData.cpp
src/NMix_PosterMeanMixParam.cpp
src/GLMM_create_SZitZiS.cpp
src/GLMM_create_ZiS.h
src/GLMM_fitted_Poisson_Log.cpp
src/MCMC_loglik_Zwork1_stres.h
src/GLMM_scale_ZitZi.cpp
src/LogLik_Bernoulli_Logit.cpp
src/GLMM_create_ZiS.cpp
src/NMix_RJMCMCdeath.cpp
src/GLMM_MCMC.cpp
src/NMix_update_sum_Ir_and_sum_Pr_y.cpp
src/GLMM_dY_meanY.cpp
src/Dist_MVT.cpp
src/NMix_PosterMeanMixParam.h
src/Dist_mixNorm.h
src/Misc_generatePermutations.cpp
src/NMix_RJMCMC_logJac_part3.cpp
src/Dist_TmixMVN.h
src/NMix_PredCDFMarg.cpp
src/MCMC_Moments_NormalApprox_QR.cpp
src/NMix_PredDensJoint2.h
src/Dist_MVN.cpp
src/NMix_PredCondDensJoint2.h
src/GLMM_fitted_Poisson_Log.h
src/NMix_reorder_Pr_y.h
src/GLMM_Deviance2.cpp
src/GLMM_fitted_Bernoulli_Logit.cpp
src/MCMC_Moments_NormalApprox.cpp
src/NMix_sum_Ir.h
src/GLMM_updateRanEf.h
src/NMix_Utils.h
src/NMix_PED_coreUni.cpp
src/GLMM_NMixRelabel.h
src/NMix_RJMCMCbirth.h
src/Rand_SamplePair.h
src/NMix_fullCondMean_WeightsMeansVars.cpp
src/NMix_updateHyperVars.cpp
src/GLMM_create_XtX.h
src/NMix_Stephens_step1.cpp
src/LogLik_Gauss_Identity.cpp
src/GLMM_Deviance2Pr_obs.h
src/GLMM_updateVars_eps.h
src/NMix_MCMC.h
src/NMix_update_sum_Ir_and_sum_Pr_y.h
src/Dist_TNorm.cpp
src/NMix_RJMCMC_logJacLambdaVSigma.cpp
src/NMix_RJMCMC_aux_vector_u.cpp
src/NMix_Stephens_costMatrix.h
src/GLMM_updateRanEf_QR.cpp
src/NMix_RJMCMC_logJac_part3.h
src/GLMM_PED.cpp
src/Dist_TNorm.h
src/NMix_Stephens_step1.h
src/NMix_RJMCMCcombine.cpp
src/Rand_SamplePair.cpp
src/Dist_Dirichlet.cpp
src/LogLik_Poisson_Log.h
src/NMix_ChainsDerived.cpp
src/NMix_PED.h
src/AK_LAPACK.cpp
src/Dist_MVT.h
src/AK_BLAS.cpp
src/NMix_orderComp.h
src/NMix_updateCensObs.cpp
src/GLMM_create_ZS.cpp
src/Dist_Discrete.cpp
src/NMix_Deviance.cpp
src/LogLik_Poisson_Log.cpp
src/NMix_PredCondDensJoint2.cpp
src/NMix_updateAlloc.cpp
src/MCMC_loglik_Zwork1_stres.cpp
src/NMix_RJMCMCsplit.cpp
src/GLMM_create_SZitZiS_4longitDA.cpp
src/Dist_TmixNorm.h
src/NMix_PredCondDensCDFMarg.h
src/NMix.h
src/Dist_mixMVN.cpp
src/NMix_Pr_y_and_cum_Pr_y.h
src/GLMM_MCMC.h
src/NMix_updateWeights.cpp
src/NMix_updateMeansVars.cpp
src/AK_Utils.cpp
src/NMix_PredDA.cpp
src/NMix_updateMeansVars.h
src/GLMM_longitDA2.h
src/GLMM_linear_predictors.cpp
src/GLMM_Deviance2.h
src/NMix_PredDensMarg.cpp
src/GLMM_NMixRelabel.cpp
src/GLMM_longitDA.cpp
src/GLMM_create_ZS.h
src/GLMM_dY_meanY.h
src/AK_LAPACK.h
src/NMix_fullCondMean_WeightsMeansVars.h
src/Rand_RotationMatrix.cpp
src/NMix_PredCondDensCDFMarg.cpp
src/Dist_mixMVN.h
src/GLMM_updateVars_eps.cpp
src/Misc_findIndexOfPermutation.h
src/NMix_NMixRelabel.cpp
src/NMix_reorder_Pr_y.cpp
src/GLMM_copy_shift_eta_meanY_Zresp.cpp
src/GLMM_Deviance2Pr_obs.cpp
src/AK_BSTAT.h
src/GLMM_Deviance.cpp
src/NMix_sum_Ir.cpp
src/Dist_Discrete.h
NAMESPACE
NEWS
data
data/PBCseq.rda
data/Faithful.rda
data/Tandmob.rda
data/Galaxy.rda
data/TandmobEmer.rda
data/Acidity.rda
data/PBC910.rda
data/Enzyme.rda
data/SimData.rda
R
R/rMVNmixture2.R R/NMixPredCondDensMarg.GLMM_MCMC.R R/plot.NMixPredCondCDFMarg.R R/Y2T.NMixPlugDensJoint2.R R/rWISHART.R R/plot.NMixPlugDensJoint2.R R/plot.NMixPredDensMarg.R R/dMVNmixture.R R/GLMM_MCMCprior.b.R R/NMixSummComp.NMixMCMC.R R/NMixChainComp.R R/NMixPredDensMarg.R R/NMixRelabel.R R/NMixRelabelAlgorithm.R R/rSamplePair.R R/dMVT.R R/NMixMCMC.R R/rcMVN.R R/cbplot.R R/NMixPlugCondDensJoint2.NMixMCMC.R R/dWISHART.R R/BLA.R R/NMixPlugDensJoint2.GLMM_MCMC.R R/plot.NMixPredCondDensJoint2.R R/SP2Rect.R R/NMixPlugDensMarg.NMixMCMC.R R/tracePlots.GLMM_MCMC.R R/NMixPlugCondDensJoint2.GLMM_MCMC.R R/dMVN.R R/NMixPredCondDensJoint2.default.R R/tracePlots.R R/GLMM_MCMCprior.eps.R R/NMixPlugCondDensMarg.default.R R/summaryDiff.R R/NMixPredDensJoint2.GLMM_MCMC.R R/NMixPredCDFMarg.default.R R/NMixPseudoGOF.R R/plot.NMixPlugCondDensJoint2.R R/plotProfiles.R R/NMixPlugDensMarg.GLMM_MCMC.R R/NMixPseudoGOF.default.R R/NMixSummComp.default.R R/rTNorm.R R/generatePermutations.R R/NMixRelabel.default.R R/GLMM_MCMCdata.R R/NMixPredCondDensJoint2.NMixMCMC.R R/print.NMixMCMC.R R/NMixRelabel.GLMM_MCMC.R R/rMVT.R R/GLMM_MCMC.R R/NMixSummComp.GLMM_MCMC.R R/Y2T.NMixPredCondDensJoint2.R R/NMixPlugDensJoint2.R R/NMixChainsDerived.R R/NMixPredCondCDFMarg.R R/NMixPlugDensJoint2.NMixMCMC.R R/NMixChainComp.GLMM_MCMC.R R/NMixRelabel.NMixMCMClist.R R/rMVNmixture.R R/print.GLMM_MCMClist.R R/Y2T.NMixPredDensMarg.R R/GLMM_longitDA.R R/plot.NMixPredDensJoint2.R R/NMixRelabel.NMixMCMC.R R/NMixPredCDFMarg.R R/dMVNmixture2.R R/print.NMixEM.R R/NMixPredCondDensMarg.R R/NMixPredCondDensMarg.NMixMCMC.R R/NMixPredCondDensMarg.default.R R/GLMM_MCMCprior.alpha.R R/getProfiles.R R/Y2T.NMixPredDensJoint2.R R/NMixPredDensJoint2.default.R R/NMixPlugDA.R R/NMixPredCondDensJoint2.R R/Y2T.NMixPredCondCDFMarg.R R/GLMM_MCMCifit.R R/Y2T.NMixPlugCondDensJoint2.R R/NMixPredCondCDFMarg.GLMM_MCMC.R R/NMixPlugDensMarg.R R/NMixPlugCondDensJoint2.default.R R/tracePlots.NMixMCMC.R R/NMixChainComp.NMixMCMC.R R/MatMPpinv.R R/GLMM_longitDA2.R R/NMixPlugCondDensMarg.GLMM_MCMC.R R/rRotationMatrix.R R/NMixCluster.default.R R/NMixPlugDensMarg.default.R R/NMixPredDensMarg.GLMM_MCMC.R R/NMixPredCondCDFMarg.NMixMCMC.R R/plot.NMixPredCondDensMarg.R R/autolayout.R R/NMixPredCondDensJoint2.GLMM_MCMC.R R/NMixRelabel.GLMM_MCMClist.R R/NMixPredDA.R R/BsBasis.R R/NMixPlugDensJoint2.default.R R/Y2T.R R/NMixCluster.R R/NMixPredDensMarg.default.R R/NMixPseudoGOF.NMixMCMC.R R/NMixCluster.GLMM_MCMC.R R/print.NMixMCMClist.R R/NMixPlugCondDensMarg.NMixMCMC.R R/rDirichlet.R R/fitted.GLMM_MCMC.R R/NMixPredCDFMarg.GLMM_MCMC.R R/rMVN.R R/tracePlots.default.R R/NMixPlugCondDensMarg.R R/tracePlots.NMixMCMClist.R R/NMixPredCondCDFMarg.default.R R/GLMM_MCMCscale.b.R R/NMixEM.R R/GLMM_MCMCwrapper.R R/MatSqrt.R R/GLMM_MCMCinit.alpha.R R/NMixMCMCinity.R R/NMixSummComp.R R/NMixPredCDFMarg.NMixMCMC.R R/plot.NMixPlugDensMarg.R R/print.GLMM_MCMC.R R/NMixPlugCondDensJoint2.R R/GLMM_MCMCinit.b.R R/NMixPredDensJoint2.NMixMCMC.R R/Y2T.NMixPlugCondDensMarg.R R/NMixMCMCwrapper.R R/rTMVN.R R/Y2T.NMixPredCondDensMarg.R R/NMixMCMCinitr.R R/Y2T.NMixPredCDFMarg.R R/NMixPredDensJoint2.R R/NMixMCMCdata.R R/NMixChainComp.default.R R/plot.NMixPlugCondDensMarg.R R/tracePlots.GLMM_MCMClist.R R/zzz.R R/GLMM_MCMCinit.eps.R R/NMixPredDensMarg.NMixMCMC.R R/Y2T.NMixPlugDensMarg.R R/plot.NMixPredCDFMarg.R
MD5
DESCRIPTION
man
man/plot.NMixPlugDensMarg.Rd man/Enzyme.Rd man/MVN.Rd man/plotProfiles.Rd man/plot.NMixPredCondDensJoint2.Rd man/getProfiles.Rd man/SimData.Rd man/NMixMCMCdata.Rd man/NMixMCMCinity.Rd man/NMixPlugDA.Rd man/GLMMlongitDA.Rd man/GLMMMCMCdata.Rd man/NMixMCMCwrapper.Rd man/plot.NMixPredDensJoint2.Rd man/NMixMCMCinitr.Rd man/TMVN.Rd man/NMixPlugDensMarg.Rd man/NMixPredDensJoint2.Rd man/GLMMMCMC.Rd man/autolayout.Rd man/plot.NMixPlugCondDensMarg.Rd man/NMixRelabel.Rd man/plot.NMixPlugDensJoint2.Rd man/Galaxy.Rd man/BsBasis.Rd man/NMixPlugCondDensMarg.Rd man/rSamplePair.Rd man/NMixChainsDerived.Rd man/Y2T.Rd man/cbplot.Rd man/NMixEM.Rd man/NMixPredCondCDFMarg.Rd man/GLMMMCMCinit.b.Rd man/GLMMMCMCifit.Rd man/plot.NMixPredCDFMarg.Rd man/GLMMMCMCprior.alpha.Rd man/BLA.Rd man/Wishart.Rd man/plot.NMixPlugCondDensJoint2.Rd man/generatePermutations.Rd man/NMixPredCondDensMarg.Rd man/fitted.GLMMMCMC.Rd man/GLMMMCMCinit.eps.Rd man/MVNmixture.Rd man/NMixPredDensMarg.Rd man/GLMMMCMCprior.eps.Rd man/NMixMCMC.Rd man/NMixPredCondDensJoint2.Rd man/NMixChainComp.Rd man/Tandmob.Rd man/NMixPlugCondDensJoint2.Rd man/tracePlots.Rd man/NMixSummComp.Rd man/TNorm.Rd man/Dirichlet.Rd man/MatMPpinv.Rd man/NMixPlugDensJoint2.Rd man/GLMMlongitDA2.Rd man/plot.NMixPredCondDensMarg.Rd man/plot.NMixPredCondCDFMarg.Rd man/Acidity.Rd man/NMixPredDA.Rd man/summaryDiff.Rd man/plot.NMixPredDensMarg.Rd man/GLMMMCMCscale.b.Rd man/GLMMMCMCwrapper.Rd man/rRotationMatrix.Rd man/TandmobEmer.Rd man/PBC910.Rd man/PBCseq.Rd man/MVT.Rd man/NMixPseudoGOF.Rd man/NMixRelabelAlgorithm.Rd man/SP2Rect.Rd man/NMixCluster.Rd man/GLMMMCMCprior.b.Rd man/NMixPredCDFMarg.Rd man/Faithful.Rd man/MatSqrt.Rd man/GLMMMCMCinit.alpha.Rd
mixAK documentation built on May 29, 2017, 9:20 p.m.