computemap: Computes map distances

In mpMap: Multi-parent RIL genetic analysis

Description

Given an mpcross object with a map order and matrix of recombination fractions, this function will estimate map positions

Usage

  computemap(object, mapfx = c("haldane", "kosambi"),
    missfx = 2)

Arguments

object	Object of class mpcross
mapfx	Map function to convert recombination fractions to cM
missfx	Function to impute missing recombination fraction values

Value

An mpcross object is returned whose map component has been estimated based on the map order and matrix of recombination fractions. Missing recombination fractions are imputed either by filling in the closest non-missing value (missfx=1) or by averaging the distance between other nearby markers (missfx=2).

See Also

mpcross

mpMap documentation built on May 29, 2017, 2:50 p.m.