nai: Count how many generations of advanced intercross are in a...
In mpMap: Multi-parent RIL genetic analysis

Counts the number of generations of breeding preceding selfing and subtracts off the number necessary to minimally mix the founders' genomes

1	nai(pedigree)

pedigree

Pedigree for a multi-parent cross. Can be generated using sim.mpped

Integer - number of generations of advanced intercrossing after mixing stage but before selfing.

sim.map <- list(Chr1=seq(0,100,10))
sim.ped <- sim.mpped(4, 1, 500, 6, 1)
nai(sim.ped)
sim.ped <- sim.mpped(4, 1, 500, 6, 1, 5)
nai(sim.ped)

mpMap documentation built on May 29, 2017, 2:50 p.m.

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