Description Usage Arguments Value See Also Examples
Given the output from a scan of chromosomes with significant genetic variation, fits a full mixed model containing all effects in base model and all QTL effects.
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object |
Object of class |
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Additional arguments to be used in
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An asreml model and summary table of QTL effects, p-values and Wald statistics from fitting the full model.
1 2 3 4 5 6 | sim.map <- sim.map(len=rep(100, 2), n.mar=11, include.x=FALSE, eq.spacing=TRUE)
sim.ped <- sim.mpped(4, 1, 500, 6, 1)
sim.dat <- sim.mpcross(map=sim.map, pedigree=sim.ped, qtl=matrix(data=c(1, 10, .4, 0, 0, 0, 1, 70, 0, .35, 0, 0), nrow=2, ncol=6, byrow=TRUE), seed=1)
mpp.dat <- mpprob(sim.dat, program="qtl", step=2)
mpq.dat <- mpIM(object=mpp.dat, ncov=0, responsename="pheno")
fit(mpq.dat)
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