summary.mpcross: Summary of mpcross object

Description Usage Arguments Value See Also Examples

View source: R/summary.mpcross.R

Description

Summarizes mpcross object in terms of number of markers, lines, type of markers, and quality of markers

Usage

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  ## S3 method for class 'mpcross'
 summary(object, ...)

Arguments

object

Object of class mpcross

...

Additional arguments

Value

Printed summary including - markers which had to be removed due to monomorphic or missing founders; numbers of biallelic/multiallelic markers; percent of markers with missing data; percent of markers with high segregation distortion.

See Also

mpcross

Examples

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sim.map <- sim.map(len=rep(100, 2), n.mar=11, include.x=FALSE, eq.spacing=TRUE)
sim.ped <- sim.mpped(4, 1, 500, 6, 1)
sim.dat <- sim.mpcross(map=sim.map, pedigree=sim.ped, qtl=matrix(data=c(1, 10, .4, 0, 0, 0, 1, 70, 0, .35, 0, 0), nrow=2, ncol=6, byrow=TRUE), seed=1)
summary(sim.dat)

mpMap documentation built on May 29, 2017, 2:50 p.m.