ntaxa: Number of taxa in a BIOM.
In rbiom: Read/Write, Transform, and Summarize 'BIOM' Data
Description
Usage
Arguments
Value
See Also
Examples
Description
Number of taxa in a BIOM.
Usage
1
ntaxa(biom)
Arguments
biom
A BIOM object, as returned from read.biom.
Value
The number of taxa present.
See Also
Other accessor functions:
counts(),
info(),
metadata(),
nsamples(),
phylogeny(),
sample.names(),
sequences(),
taxa.names(),
taxa.ranks(),
taxonomy()
Examples
1
2
3
4
5
6
library(rbiom)
infile <- system.file("extdata", "hmp50.bz2", package = "rbiom")
biom <- read.biom(infile)
ntaxa(biom)
rbiom documentation built on Nov. 5, 2021, 9:11 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value See Also Examples
Description
Number of taxa in a BIOM.
Usage
1 | ntaxa(biom)
|
Arguments
biom |
A |
Value
The number of taxa present.
See Also
Other accessor functions:
counts(),
info(),
metadata(),
nsamples(),
phylogeny(),
sample.names(),
sequences(),
taxa.names(),
taxa.ranks(),
taxonomy()
Examples
1 2 3 4 5 6 | library(rbiom)
infile <- system.file("extdata", "hmp50.bz2", package = "rbiom")
biom <- read.biom(infile)
ntaxa(biom)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.