write.fasta: Write sequences from a BIOM object to a file in fasta format.

Description Usage Arguments Value

Description

Write sequences from a BIOM object to a file in fasta format.

Usage

1
write.fasta(seqs, outfile)

Arguments

seqs

A named character vector where names are sequence names and values are the sequences. Also accepts a BIOM object which contains sequences.

outfile

Path to the output fasta file. Files ending in .gz or .bz2 will be compressed accordingly.

Value

On success, returns NULL invisibly.


rbiom documentation built on July 2, 2020, 1:47 a.m.