step_dummy: Dummy Variables Creation

Description Usage Arguments Details Value See Also Examples

View source: R/dummy.R

Description

step_dummy() creates a specification of a recipe step that will convert nominal data (e.g. character or factors) into one or more numeric binary model terms for the levels of the original data.

Usage

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step_dummy(
  recipe,
  ...,
  role = "predictor",
  trained = FALSE,
  one_hot = FALSE,
  preserve = deprecated(),
  naming = dummy_names,
  levels = NULL,
  keep_original_cols = FALSE,
  skip = FALSE,
  id = rand_id("dummy")
)

## S3 method for class 'step_dummy'
tidy(x, ...)

Arguments

recipe

A recipe object. The step will be added to the sequence of operations for this recipe.

...

One or more selector functions to choose which factor variables will be used to create the dummy variables. See selections() for more details. The selected variables must be factors. For the tidy() method, these are not currently used.

role

For model terms created by this step, what analysis role should they be assigned?. By default, the function assumes that the binary dummy variable columns created by the original variables will be used as predictors in a model.

trained

A logical to indicate if the quantities for preprocessing have been estimated.

one_hot

A logical. For C levels, should C dummy variables be created rather than C-1?

preserve

Use keep_original_cols to specify whether the selected column(s) should be retained (in addition to the new dummy variables).

naming

A function that defines the naming convention for new dummy columns. See Details below.

levels

A list that contains the information needed to create dummy variables for each variable contained in terms. This is NULL until the step is trained by prep.recipe().

keep_original_cols

A logical to keep the original variables in the output. Defaults to FALSE.

skip

A logical. Should the step be skipped when the recipe is baked by bake.recipe()? While all operations are baked when prep.recipe() is run, some operations may not be able to be conducted on new data (e.g. processing the outcome variable(s)). Care should be taken when using skip = TRUE as it may affect the computations for subsequent operations

id

A character string that is unique to this step to identify it.

x

A step_dummy object.

Details

step_dummy() will create a set of binary dummy variables from a factor variable. For example, if an unordered factor column in the data set has levels of "red", "green", "blue", the dummy variable bake will create two additional columns of 0/1 data for two of those three values (and remove the original column). For ordered factors, polynomial contrasts are used to encode the numeric values.

By default, the excluded dummy variable (i.e. the reference cell) will correspond to the first level of the unordered factor being converted.

The function allows for non-standard naming of the resulting variables. For an unordered factor named x, with levels "a" and "b", the default naming convention would be to create a new variable called x_b. Note that if the factor levels are not valid variable names (e.g. "some text with spaces"), it will be changed by base::make.names() to be valid (see the example below). The naming format can be changed using the naming argument and the function dummy_names() is the default. This function will also change the names of ordinal dummy variables. Instead of values such as ".L", ".Q", or "^4", ordinal dummy variables are given simple integer suffixes such as "_1", "_2", etc.

To change the type of contrast being used, change the global contrast option via options.

When the factor being converted has a missing value, all of the corresponding dummy variables are also missing. See step_unknown() for a solution.

When data to be processed contains novel levels (i.e., not contained in the training set), a missing value is assigned to the results. See step_other() for an alternative.

If no columns are selected (perhaps due to an earlier step_zv()), bake() will return the data as-is (e.g. with no dummy variables).

Note that, by default, the new dummy variable column names obey the naming rules for columns. If there are levels such as "0", dummy_names() will put a leading "X" in front of the level (since it uses make.names()). This can be changed by passing in a different function to the naming argument for this step.

The package vignette for dummy variables and interactions has more information.

Value

An updated version of recipe with the new step added to the sequence of existing steps (if any). For the tidy method, a tibble with columns terms (the selectors or original variables selected) and columns (the list of corresponding binary columns).

See Also

step_factor2string(), step_string2factor(), dummy_names(), step_regex(), step_count(), step_ordinalscore(), step_unorder(), step_other() step_novel()

Examples

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library(modeldata)
data(okc)
okc <- okc[complete.cases(okc),]

# Original data: diet has 18 levels
length(unique(okc$diet))
unique(okc$diet) %>% sort()

rec <- recipe(~ diet + age + height, data = okc)

# Default dummy coding: 17 dummy variables
dummies <- rec %>%
    step_dummy(diet) %>%
    prep(training = okc)

dummy_data <- bake(dummies, new_data = NULL)

dummy_data %>%
    select(starts_with("diet")) %>%
    names() # level "anything" is the reference level

# Obtain the full set of 18 dummy variables using `one_hot` option
dummies_one_hot <- rec %>%
    step_dummy(diet, one_hot = TRUE) %>%
    prep(training = okc)

dummy_data_one_hot <- bake(dummies_one_hot, new_data = NULL)

dummy_data_one_hot %>%
    select(starts_with("diet")) %>%
    names() # no reference level


tidy(dummies, number = 1)
tidy(dummies_one_hot, number = 1)

Example output

Loading required package: dplyr

Attaching package:dplyrThe following objects are masked frompackage:stats:

    filter, lag

The following objects are masked frompackage:base:

    intersect, setdiff, setequal, union


Attaching package:recipesThe following object is masked frompackage:stats:

    step

[1] 18
 [1] "anything"            "halal"               "kosher"             
 [4] "mostly anything"     "mostly halal"        "mostly kosher"      
 [7] "mostly other"        "mostly vegan"        "mostly vegetarian"  
[10] "other"               "strictly anything"   "strictly halal"     
[13] "strictly kosher"     "strictly other"      "strictly vegan"     
[16] "strictly vegetarian" "vegan"               "vegetarian"         
 [1] "diet_halal"               "diet_kosher"             
 [3] "diet_mostly.anything"     "diet_mostly.halal"       
 [5] "diet_mostly.kosher"       "diet_mostly.other"       
 [7] "diet_mostly.vegan"        "diet_mostly.vegetarian"  
 [9] "diet_other"               "diet_strictly.anything"  
[11] "diet_strictly.halal"      "diet_strictly.kosher"    
[13] "diet_strictly.other"      "diet_strictly.vegan"     
[15] "diet_strictly.vegetarian" "diet_vegan"              
[17] "diet_vegetarian"         
 [1] "diet_anything"            "diet_halal"              
 [3] "diet_kosher"              "diet_mostly.anything"    
 [5] "diet_mostly.halal"        "diet_mostly.kosher"      
 [7] "diet_mostly.other"        "diet_mostly.vegan"       
 [9] "diet_mostly.vegetarian"   "diet_other"              
[11] "diet_strictly.anything"   "diet_strictly.halal"     
[13] "diet_strictly.kosher"     "diet_strictly.other"     
[15] "diet_strictly.vegan"      "diet_strictly.vegetarian"
[17] "diet_vegan"               "diet_vegetarian"         
# A tibble: 18 x 3
   terms columns             id         
   <chr> <chr>               <chr>      
 1 diet  anything            dummy_WIGeP
 2 diet  halal               dummy_WIGeP
 3 diet  kosher              dummy_WIGeP
 4 diet  mostly anything     dummy_WIGeP
 5 diet  mostly halal        dummy_WIGeP
 6 diet  mostly kosher       dummy_WIGeP
 7 diet  mostly other        dummy_WIGeP
 8 diet  mostly vegan        dummy_WIGeP
 9 diet  mostly vegetarian   dummy_WIGeP
10 diet  other               dummy_WIGeP
11 diet  strictly anything   dummy_WIGeP
12 diet  strictly halal      dummy_WIGeP
13 diet  strictly kosher     dummy_WIGeP
14 diet  strictly other      dummy_WIGeP
15 diet  strictly vegan      dummy_WIGeP
16 diet  strictly vegetarian dummy_WIGeP
17 diet  vegan               dummy_WIGeP
18 diet  vegetarian          dummy_WIGeP
# A tibble: 18 x 3
   terms columns             id         
   <chr> <chr>               <chr>      
 1 diet  anything            dummy_SZQeS
 2 diet  halal               dummy_SZQeS
 3 diet  kosher              dummy_SZQeS
 4 diet  mostly anything     dummy_SZQeS
 5 diet  mostly halal        dummy_SZQeS
 6 diet  mostly kosher       dummy_SZQeS
 7 diet  mostly other        dummy_SZQeS
 8 diet  mostly vegan        dummy_SZQeS
 9 diet  mostly vegetarian   dummy_SZQeS
10 diet  other               dummy_SZQeS
11 diet  strictly anything   dummy_SZQeS
12 diet  strictly halal      dummy_SZQeS
13 diet  strictly kosher     dummy_SZQeS
14 diet  strictly other      dummy_SZQeS
15 diet  strictly vegan      dummy_SZQeS
16 diet  strictly vegetarian dummy_SZQeS
17 diet  vegan               dummy_SZQeS
18 diet  vegetarian          dummy_SZQeS

recipes documentation built on April 16, 2021, 5:09 p.m.