SignifFeatureRegion: SignifFeatureRegion

In shinyWGD: 'Shiny' Application for Whole Genome Duplication Analysis

SignifFeatureRegion

Description

This function computes the significance of features based on gradient and curvature analysis.

Usage

SignifFeatureRegion(
  n,
  d,
  gcounts,
  gridsize,
  dest,
  bandwidth,
  signifLevel,
  range.x,
  grad = TRUE,
  curv = TRUE,
  neg.curv.only = TRUE
)

Arguments

n	The sample size.
d	The dimensionality of the data.
gcounts	A numeric vector representing data counts.
gridsize	A numeric vector specifying the grid size.
dest	A kernel density estimate.
bandwidth	The bandwidth parameter.
signifLevel	The significance level.
range.x	The range of x values.
grad	A logical value indicating whether to compute the gradient significance.
curv	A logical value indicating whether to compute the curvature significance.
neg.curv.only	A logical value indicating whether to consider negative curvature only.

Value

A list containing the significance results for gradient and curvature.

shinyWGD documentation built on April 4, 2025, 2:28 a.m.