Clean up after an SS3 run

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Description

Removes all of the unwanted output files from the specified directory.

Usage

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cleanup_ss3(dir_name, clean_vector = c("admodel.*", "ss3.eva", "fmin.log",
  "*.rpt", "variance", "ss3.b0*", "ss3.p0*", "ss3.r0*", "ss3.bar", "ss3.cor",
  "ss3.log", "ss3.rep", "checkup.sso", "cumreport.sso",
  "derived_posteriors.sso ", "echoinput.sso", "parmtrace.sso",
  "posterior_vectors.sso", "posteriors.sso", "rebuild.sso", "sis_table.sso",
  "data.ss_new", "forecast.ss_new", "control.ss_new", "starter.ss_new",
  "wtatage.ss_new"))

Arguments

dir_name

The directory of interest, the function ignores case (i.e. names can be specified as lower or upper case)

clean_vector

A vector of characters specifying the unwanted files to be removed. The function allows the use of wildcards (i.e. "*").

Author(s)

Kelli Johnson

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