case_index: Write a case file for index data to the disk.

In ss3sim: Fisheries Stock Assessment Simulation Testing with Stock Synthesis

Description

Use R code to write arguments to the disk, which will later be used in a ss3sim simulation.

Usage

case_index(fleets = 1, years = NULL, sd = 2, case, spp)

Arguments

fleets	Vector of fleet numbers, where the order of fleets will dictate the order of all remaining arguments.
years	A list of length length(fleets), where each element of the list contains a vector of years for the given fleet.
sd	A list of standard deviations for each fleet.
case	The case number you want to write to. If case = 1, then the result will be 'index1'.
spp	A vector of character values argument specifying the species.

Examples

case_index(fleets = 2, case = 1, spp = "cod", years = list(7:10), sd = 0.1)
done <- file.remove("index1-cod.txt")

ss3sim documentation built on Nov. 9, 2019, 1:06 a.m.