Nothing
stylo.network = function(mfw.min = 100, mfw.max = 1000, ...) {
#
# if any command-line arguments have been passed by a user, they will
# be stored on the following list and used to overwrite the defaults
passed.arguments = list(...)
# 'networkD3' is a package for using the D3.js library.
# Since it is suggested (not required!) by 'stylo', one has to first
# test if it is installed in the system:
test.networkD3 = tryCatch(networkD3::as.radialNetwork(hclust(dist(cbind(c(1,2),c(3,4))))),
error = function(e) NULL)
if(is.null(test.networkD3) == TRUE) {
stop("To use this function, you have to install the library 'networkD3',
e.g. by typing install.packages('networkD3') in the console")
}
# now, launching stylo with consensus network options on:
a = stylo(mfw.min = mfw.min, mfw.max = mfw.max, display.on.screen = FALSE,
analysis.type = "BCT",
network = TRUE, network.tables = "both", ...)
# getting the nodes and the edges from the results produced by 'stylo':
nodes.table = a$list.of.nodes
edges.table = a$list.of.edges
# Show Time!
# this function opens a browser and produces an interactive force-directed
# network out of the nodes and edges provided by 'stylo':
results = networkD3::forceNetwork(Links = edges.table, Nodes = nodes.table,
Source = "Source", Target = "Target",
Value = "Weight", NodeID = "Label",
Group = "Group", opacity = 0.8, zoom = TRUE,
opacityNoHover = TRUE, fontFamily = "Helvetica",
bounded = TRUE, charge = -100)
# outputting the results
return(results)
}
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