data-raw/psm_tmt_phospho.R
In CambridgeCentreForProteomics/camprotR: Processing, analysing and visualising CCP proteomics data
# Read in PSM data
tmt_phospho <- read.delim(
here::here("data-raw/Anja_phospho_lopit_phosphoproteome_rep2_PSMs.txt")
)
# Set seed for reproducible sampling
set.seed(2021)
# Randomly sample 5000 rows
psm_tmt_phospho <- tmt_phospho[sample(nrow(tmt_phospho), 5000), ]
# Output .rda file
usethis::use_data(psm_tmt_phospho)
CambridgeCentreForProteomics/camprotR documentation built on Jan. 27, 2023, 8:36 p.m.
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# Read in PSM data
tmt_phospho <- read.delim(
here::here("data-raw/Anja_phospho_lopit_phosphoproteome_rep2_PSMs.txt")
)
# Set seed for reproducible sampling
set.seed(2021)
# Randomly sample 5000 rows
psm_tmt_phospho <- tmt_phospho[sample(nrow(tmt_phospho), 5000), ]
# Output .rda file
usethis::use_data(psm_tmt_phospho)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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