Man pages for CaronLab/MHCIatlas
Package to reproduce data analysis and further explore the data depicted by Kubiniok et al. 2021 in 'Global Analysis of the Mammalian MHC class I Immunopeptidome at the Organism-Wide Scale'.
| AnalCorrHuman | AnalCorrHuman |
| BasicAnalHuman | BasicAnalHuman |
| BasicAnalMouse | BasicAnalMouse |
| ComparePeaksHuman | ComparePeaksHuman |
| ConservationHuman | ConservationHuman |
| ConservationMouse | ConservationMouse |
| getAccessions | getAccessions |
| GetHumanMHCIdata | GetHumanMHCIdata |
| GetMouseMHCIdata | GetMouseMHCIdata |
| HousekeepersHuman | HousekeepersHuman |
| MakeCorrHuman | MakeCorrHuman |
| MakeCorrMouse | MakeCorrMouse |
| mkFigure2 | mkFigure2 |
| mkFigure3 | mkFigure3 |
| mkFigure4 | mkFigure4 |
| mkFigure5 | mkFigure5 |
| mkFigure6 | mkFigure6 |
| mkHumanConnectivityMap | mkHumanConnectivityMap |
| mkMouseConnectivityMap | mkMouseConnectivityMap |
| PlotsHumanProtCorr | PlotsHumanProtCorr |
| PlotsMouseProtCorr | PlotsMouseProtCorr |
| ProgressBar | ProgressBar |
| SigCorrsHuman | SigCorrsHuman |
| SigCorrsMouse | SigCorrsMouse |
| SupplFigure10 | SupplFigure10 |
| SupplFigure2 | SupplFigure2 |
| SupplFigure3 | SupplFigure3 |
| SupplFigure4 | SupplFigure4 |
| SupplFigure5 | SupplFigure5 |
| SupplFigure6 | SupplFigure6 |
