SigCorrsMouse: SigCorrsMouse

In CaronLab/MHCIatlas: Package to reproduce data analysis and further explore the data depicted by Kubiniok et al. 2021 in 'Global Analysis of the Mammalian MHC class I Immunopeptidome at the Organism-Wide Scale'.

Description

Retrieve significantly correlating proteins and their gene names

Usage

SigCorrsMouse(Mouse_ProtCorrelations, pValue_Threshold = 0.01)

Arguments

Mouse_ProtCorrelations	Output list from function MakeCorrMouse
pValue_Threshold	maximum pValue at or below which a correlation is considered significant, Default: 0.01

Details

Used to get an overview of singificantly proteins that can be used for later gene ontology analysis etc.

Value

Data frame containing significantly correlating genes and the mean correlation pValue

Examples

## Not run: 
sig_prots_m<-SigCorrsHuman(corrs_m)

## End(Not run)

CaronLab/MHCIatlas documentation built on March 10, 2021, 12:38 a.m.