getAccessions: getAccessions
In CaronLab/MHCIatlas: Package to reproduce data analysis and further explore the data depicted by Kubiniok et al. 2021 in 'Global Analysis of the Mammalian MHC class I Immunopeptidome at the Organism-Wide Scale'.
Description
Usage
Arguments
Details
Value
Examples
View source: R/getAccessions.R
Description
Function to extract entries from a UniprotKB/Swissprot fasta header
Usage
1
getAccessions(x, y)
Arguments
x
fasta header
y
position of string separated by '|' that is to be eaxtracted (From the right starting at position 0)
Details
Used withing the package MHCIatlas to aid data analysis
Value
Substring
Examples
1
2
3
4
5
## Not run:
getAccessions('sp|P55012|S12A2_MOUSE',0)
> "S12A2"
## End(Not run)
CaronLab/MHCIatlas documentation built on March 10, 2021, 12:38 a.m.
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Description Usage Arguments Details Value Examples
View source: R/getAccessions.R
Description
Function to extract entries from a UniprotKB/Swissprot fasta header
Usage
1 | getAccessions(x, y)
|
Arguments
x |
fasta header |
y |
position of string separated by '|' that is to be eaxtracted (From the right starting at position 0) |
Details
Used withing the package MHCIatlas to aid data analysis
Value
Substring
Examples
1 2 3 4 5 | ## Not run:
getAccessions('sp|P55012|S12A2_MOUSE',0)
> "S12A2"
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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