net_dis: Calculate the network distance of 'multi' and test the...
In Guan06/mina: Microbial community dIversity and Network Analysis

Description Usage Arguments Value Examples

Calculate the network distance of 'multi' and test the significance when 'perm' is defined.

1	net_dis(x, method, ...)

`x`	An object of class 'mina' with 'multi' (and 'perm' if 'sig' is TRUE) defined.
`method`	The distance to be calculated, "spectra" and "Jaccard" are available.
`...`	Additional parameters.

The netowrk comparison result.

maize <- new("mina", tab = maize_asv2, des = maize_des2)
maize <- norm_tab(maize, method = "raref")
maize <- fit_tabs(maize)
maize <- get_rep(maize, top = 5)
maize <- bs_pm(maize, group = "Compartment")
maize <- net_dis(maize, method = "spectra", evk = 30)