rarefaction_subsample: Rarefaction subsample function, one sample, modified from a...
In Guan06/mina: Microbial community dIversity and Network Analysis
Description
Usage
Arguments
Value
Description
Rarefaction subsample function, one sample, modified from a internal function
in phyloseq, find it
here.
Usage
1
rarefaction_subsample(x, depth = 1000, replace = TRUE)
Arguments
x
A column of quantitative table.
depth
The depth for rarefying, 1000 by default.
replace
Whether to sample with or without replacement, TRUE by
default for computational efficiency.
Value
The vector rarefied to defined depth.
Guan06/mina documentation built on Feb. 21, 2022, 11:56 a.m.
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Description Usage Arguments Value
Description
Rarefaction subsample function, one sample, modified from a internal function in phyloseq, find it here.
Usage
1 | rarefaction_subsample(x, depth = 1000, replace = TRUE)
|
Arguments
x |
A column of quantitative table. |
depth |
The depth for rarefying, 1000 by default. |
replace |
Whether to sample with or without replacement, |
Value
The vector rarefied to defined depth.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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