Man pages for JCVenterInstitute/FRmatch
Cell type matching in single-cell RNA-sequencing data using FR-Match
| check_data_object | Check data object |
| FRmatch | FR-Match for single cell RNA-seq data |
| FRmatch_cell2cluster | FR-Match cell-to-cluster matching |
| FRtest | Friedman-Rafsky (FR) test |
| get_values | Utility function to get the plotted values |
| make_data_object | Make data object |
| normalization | Normalization function for FR-Match analysis |
| plot_bi_FRmatch | Plotting function for bi-directional FR-Match results |
| plot_cluster_by_markers | "Barcode" plot |
| plot_clusterSize | Cluster size plot |
| plot_exprDist | Gene expression data distribution plot |
| plot_FRmatch | Plotting function for FR-Match results |
| plot_FRmatch_cell2cluster | Plotting function for FR-Match cell2cluster results |
| plot_MST | Plot minimum spanning tree (MST) |
| plot_nonzero | Non-zero expression plot |
| predict_most_similar_cluster | Prediction function for FR-Match results |
| runShiny | Shiny App for FRmatch Demo |
| sce.example | Example data object |
