Files in JCVenterInstitute/FRmatch
Cell type matching in single-cell RNA-sequencing data using FR-Match
.Rbuildignore
.gitignore
DESCRIPTION
FRmatch.Rproj
LICENSE
NAMESPACE
R/FRmatch.R
R/FRmatch_cell2cluster.R
R/FRtest.R
R/auxiliary.R
R/auxiliary_FRtest.R
R/check_data_object.R
R/data.R
R/get_values.R
R/make_data_object.R
R/normalization.R
R/other_matching_methods.R
R/plot_FRmatch.R
R/plot_FRmatch_cell2cluster.R
R/plot_MST.R
R/plot_bi_FRmatch.R
R/plot_clusterSize.R
R/plot_cluster_by_markers.R
R/plot_exprDist.R
R/plot_nonzero.R
R/predict_most_similar_cluster.R
R/runShiny.R
README.md
data/sce.example.rda
inst/data/sce-layer1-15clusters.rda
inst/data/sce-layer1-topNodes.rda
inst/shinyapp/app.R
inst/shinyapp/www/JCVI-Logo-Inline-Black.png
man/FRmatch.Rd
man/FRmatch_cell2cluster.Rd
man/FRtest.Rd
man/check_data_object.Rd
man/get_values.Rd
man/make_data_object.Rd
man/normalization.Rd
man/plot_FRmatch.Rd
man/plot_FRmatch_cell2cluster.Rd
man/plot_MST.Rd
man/plot_bi_FRmatch.Rd
man/plot_clusterSize.Rd
man/plot_cluster_by_markers.Rd
man/plot_exprDist.Rd
man/plot_nonzero.Rd
man/predict_most_similar_cluster.Rd
man/runShiny.Rd
man/sce.example.Rd
vignettes/FRmatch-scheme-v2.png
vignettes/FRmatch-sticker-2.png
vignettes/FRmatch-vignette.R
vignettes/FRmatch-vignette.Rmd
vignettes/naming-convention.png
