plot_FRmatch | R Documentation |
This function takes in the FRmatch
output and generates plots for the matching results.
plot_FRmatch( rst.FRmatch, type = "matches", p.adj.method = "BY", sig.level = 0.05, reorder = TRUE, ignore.unassigned = FALSE, return.value = FALSE, cellwidth = 10, cellheight = 10, main = NULL, filename = NA, ... )
rst.FRmatch |
The |
type |
If |
p.adj.method |
P-value adjustment method for multiple hypothesis testing correction. Default: |
sig.level |
Numeric variable that specifies the significance level of adjusted p-value. A MATCH is > |
reorder |
Boolean variable indicating if to reorder the columns so that matches are aligned along the diagonal.
It improves the interpretability of the one-way match plot. Default: |
ignore.unassigned |
Boolean variable indicating if to skip the columns of unassigned query clusters
in the |
return.value |
Boolean variable indicating if to return the plotted values. Default: |
cellwidth, cellheight, main, filename, ... |
Plotting parameters passed to |
If return.value = TRUE
, a matrix of one-way matching values 1 = match, and 0 = no match, or a matrix of adjusted p-values.
plot_bi_FRmatch
.
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