topInteracters: topInteracters
In JLP-BioInf/comradesOO: Analysis of RNA Crosslinking Data
topInteracters R Documentation
topInteracters
Description
This method prints the top transcripts that have the most duplexes
assigned that interact with the transcript of interest
Usage
topInteracters(cds, ntop = 10, sds = TRUE)
Arguments
cds
a rnaCrosslinkDataSet object
ntop
the number of entries to display
sds
known bug, doesn't work for small data sets fix incoming
Value
A table, the number of counts per sample per interacting transcript
Examples
cds = makeExamplernaCrosslinkDataSet()
topInteracters(cds, sds = TRUE)
JLP-BioInf/comradesOO documentation built on Jan. 26, 2025, 6:35 a.m.
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| topInteracters | R Documentation |
topInteracters
Description
This method prints the top transcripts that have the most duplexes assigned that interact with the transcript of interest
Usage
topInteracters(cds, ntop = 10, sds = TRUE)
Arguments
cds |
a |
ntop |
the number of entries to display |
sds |
known bug, doesn't work for small data sets fix incoming |
Value
A table, the number of counts per sample per interacting transcript
Examples
cds = makeExamplernaCrosslinkDataSet()
topInteracters(cds, sds = TRUE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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