run.Scanorama: Wraper for running Scanorama
In Japrin/scPip: pipeline for scRNA-seq data analysis
run.Scanorama R Documentation
Wraper for running Scanorama
Description
Wraper for running Scanorama
Usage
run.Scanorama(seu, col.batch = "batchV", assay.slot = "data", ...)
Arguments
seu
object of Seurat
col.batch
character; column name indicating batches (default: "batchV")
assay.slot
character; which slot to be used? (default: "data")
...
; passed to scanorama$integrate
Details
run the Scanorama
Value
a Seurat object
Japrin/scPip documentation built on Jan. 29, 2024, 1:20 a.m.
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| run.Scanorama | R Documentation |
Wraper for running Scanorama
Description
Wraper for running Scanorama
Usage
run.Scanorama(seu, col.batch = "batchV", assay.slot = "data", ...)
Arguments
seu |
object of |
col.batch |
character; column name indicating batches (default: "batchV") |
assay.slot |
character; which slot to be used? (default: "data") |
... |
; passed to scanorama$integrate |
Details
run the Scanorama
Value
a Seurat object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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