replaceGroupId: Replace group and geneder presentation into proper PLINK...

Description Usage Arguments Value Author(s)

Description

Replace group and gender presentation into proper and consistent PLINK format.

Usage

1
replaceGroupId(plink, inputPrefix, metaDataFile, outputPrefix)

Arguments

plink

an executable PLINK program in either the current working directory or somewhere in the command path.

inputPrefix

the prefix of the input PLINK format files.

metaDataFile

a pure text file that stores the meta information of the samples.

outputPrefix

the prefix of the output PLINK format files.

Value

The output PLINK format files after presenting gender/group/outcome information into proper PLINK format.

Author(s)

Junfang Chen <junfang.chen3@gmail.com>


Junfang/Gimpute documentation built on May 17, 2019, 10:11 p.m.