junctionMotif: Extract junction motif(s) from genome
In KasperThystrup/circulaR: Characterization of circRNAs from Total RNA-seq data
Description
Usage
Arguments
Value
View source: R/helper_functions.r
Description
This function takes a vector of bsIDs and a BSgenome-object and constructs junction-motifs of the backsplice junctions.
Usage
1
junctionMotif(bsids, g = Hsapiens)
Arguments
bsids
An character vector with bsIDs.
g
A BS genome object. Default Hsapiens.
Value
Character vector with the junction motifs.
KasperThystrup/circulaR documentation built on March 14, 2021, 12:44 p.m.
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Description Usage Arguments Value
View source: R/helper_functions.r
Description
This function takes a vector of bsIDs and a BSgenome-object and constructs junction-motifs of the backsplice junctions.
Usage
1 | junctionMotif(bsids, g = Hsapiens)
|
Arguments
bsids |
An character vector with bsIDs. |
g |
A BS genome object. Default Hsapiens. |
Value
Character vector with the junction motifs.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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