plotAll: Make homemade sashimi plot

In KasperThystrup/circulaR: Characterization of circRNAs from Total RNA-seq data

Description

Plot transcript models and show linear and backsplice jjunctions.

Usage

plotAll(
  DB = txdb,
  sj = sj.data,
  bsj = bsj.data,
  region = region.of.interest,
  gid = g,
  ...
)

Arguments

DB	TxDb of transcripts
sj	Linear splice junction data (output from readSJ)
bsj	Backsplice junction data (output from readBSJ)
region	GRanges object describing the region of interest
gid	Ensembl gene id to plot grid.newpage

KasperThystrup/circulaR documentation built on March 14, 2021, 12:44 p.m.