plotTxModels: Plot transcript models.

Description Usage Arguments

View source: R/plot_functions.r

Description

Using data stored in an EnsDB from AnnotationHub.

Usage

1
plotTxModels(db = NULL, g = NULL, tid = NULL, showDirection = T, rangex = NULL)

Arguments

db

A db containing transcript models from AnnotationHub/Ensembl.

g

Specify which gene to plot (Ensembl Gene ID).

showDirection

Boolean indicating wheter to add chevrons to intronic regions to indicate direction of the transcript.

rangex

The range in genomic coordinates for the region of interest. This is important for correct alignment of the tx model plot with splice junction plot.


KasperThystrup/circulaR documentation built on March 14, 2021, 12:44 p.m.